Jaenike, J. 2007. Spontaneous emergence of a new Wolbachia phenotype. Evolution, 61(9), :2244-2252

Jaenike, J. 2007. Fighting back against male killers. Trends Ecol. Evol. 22:167-169

Jaenike, J., K. A. Dyer, C. Cornish, and M. S. Minhas.  2006. Asymmetrical reinforcement and Wolbachia infection in Drosophila. PLoS Biol. Oct;4(10):e325

Simunovic, A. and J. Jaenike. 2006. Adaptive variation among Drosophila species in their circadian rhythms. Evolutionary Ecology Research 8: 803-811

Sullivan, J. and J. Jaenike. 2006. Male-killing Wolbachia and male mate choice: a test with Drosophila innubila. Evolutionary Ecology Research 8: 91-102.

Dyer, K. A. and J. Jaenike. 2005. Evolutionary dynamics of a spatially structured host-parasite association: Drosophila innubila and male-killing Wolbachia. Evolution 59: 1518-1528

Dyer, K. A., M. Minhas, and J. Jaenike. 2005. Expression and modulation of embryonic male-killing in Drosophila innubila: opportunities for multi-level selection. Evolution 59: 838-848.

Shoemaker, D. D., K. A. Dyer, M. Ahrens, K. McAbee, and J. Jaenike. 2004. Molecular evolutionary effects of Wolbachia infections: decreased diversity but increased substitution rate in host mtDNA. Genetics 168: 2049-2058.

Dyer, K. A. and J. Jaenike. 2004. Evolutionarily stable infection by a male-killing endosymbiont in Drosophila innubila: molecular evidence from the host and parasite genomes. Genetics 168: 1443-1445

Dombeck, I. and J. Jaenike. 2004. Ecological genetics of abdominal pigmentation in Drosophila falleni. Evolution 58: 587-596

Jaenike, J., K. A. Dyer, and L. Reed. 2003. Within-population structure of competition and the dynamics of male-killing Wolbachia. Evolutionary Ecology Research 5: 1023-1036.

   

Perlman, S. J. and J. Jaenike. 2003. Infection success in novel hosts: an experimental phylogenetic study of Drosophila parasitic nematodes. Evolution 57: 544-557.